Applied Biosystems Genetic Analysis Systems | Thermo Fisher Scientific

Applied Biosystems genetic analyzers are a trusted standard for Sanger sequencing and fragment analysis by capillary electrophoresis (CE). Our instruments add simplicity, scalability, and speed to your workflow, enabling you to analyze your most difficult samples with complete confidence. Versatile and innovative, our systems have been designed with you in mind to meet the demands of your genetic analysis needs, whether you are running a few samples or need larger scale options.

Low to high sample throughput—choose the genetic analyzer that is right for you

	Lowest sample throughput, easy-to-use, flexible system	Medium sample throughput, basic and automated operation system	Maximum throughput, scalability, and flexibility
	SeqStudio Genetic Analyzer	3500 Series Genetic Analyzer	Refreshed 3730 Series Genetic Analyzer
	Request a quote	Request a quote	Request a quote
Number of capillaries	4	8 (3500), 24 (3500xL)	48 (3730), 96 (3730xl)
Ease of use	Simple	Easy	Moderate
Number of dyes	6	6	5
Capillary array length (cm)	Integrated into click-in cartridge	36, 50	36, 50
RFID	Yes	Yes	No
Polymer type	POP-1 integrated into click-in cartridge	POP-6, POP-7, POP-4*	POP-6, POP-7
Sample capacity	12 standard 8-strip tubes 1 standard 96-well plate	2 sample plates (96- or 384-well)	16 sample plates (96- or 384- well)
Integrated plate stacker	No	No	Yes
Applications	Sequencing + fragment analysis on same run	Sequencing, fragment analysis	Sequencing, fragment analysis
Minimum run time	30 min	30 min	20 min
Sequencing read length (bp)	800	At least 850	900
Maximum sequencing throughput (base pair reads/day)	67k	138k (3500), 403k (3500xL)	1.38 M (3730), 2.76 M (3730xL)
Maximum fragment throughput (samples/day)**	192	384 (3500), 1,152 (3500xL)	3,456 (3730), 6,912 (3730xl)
	Learn more	Learn more	Learn more

* POP-4 is generally only used with HID applications and requires GeneMapper ID-X Software for analysis.
** 96 capillaries are not recommended for fragment analysis.

Genetic analyzers ready for your regulatory and industry needs

SeqStudio Series genetic analyzers

The Applied Biosystems SeqStudio Series systems deliver the high quality and reliable performance of Sanger sequencing and fragment analysis that scientists need, while leveraging design improvements and technological advances for increased flexibility, easier operation, enhanced connectivity, and remote serviceability.

With a wide range of applications from simple, targeted sequencing to identification of the latest SARS variant of concern, SeqStudio Series instruments help you to achieve freedom and peace of mind, providing extra time in your day to do what you do best: answering the big scientific questions.

Learn more about SeqStudio Family enabled applications. Download the SeqStudio Family Application Guide ›

For a low-scale, cost-effective option: Discover SeqStudio ›
For a mid-scale, efficient and flexible option: Discover SeqStudio Flex ›

Need high-throughput solution? Find the right analyzer for your testing needs ›