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SNP ID:
rs6265
Gene
BDNF BDNF-AS
Gene Name
Set Membership:
> HapMap > Validated
Chromosome Location:
Chr.11: 27658369 - 27658369 on Build GRCh38
Polymorphism:
C/T, Transition substitution
Context Sequence [VIC/FAM]:

TCCTCATCCAACAGCTCTTCTATCA[C/T]GTGTTCGAAAGTGTCAGCCAATGAT

Assay ID C__11592758_10
Size
Availability Made To Order
Catalog # 4351379
Price
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Assay Details



Species:

 Human

dbSNP Submissions:

 NA

Phenotype:

 MIM: 113505 MIM: 611468

Literature Links:

 BDNF PubMed Links

Allele Nomenclature:

Minor Allele Frequency:
1000Genome Applied Biosystems® HapMap
Global
A (0.20)
(0.80)
Caucasian
T (0.22)
(0.78)
CEPH (CEU)
A (0.20)
(0.80)
EAS
A (0.49)
(0.51)
African American
T (0.05)
(0.95)
YRI (Yoruba)
A (0.00)
(1.00)
SAS
A (0.20)
(0.80)
Chinese - Not Available JPT (Japanese)
A (0.37)
(0.63)
AFR
A (0.01)
(0.99)
Japanese - Not Available CHB (Han Chinese)
G (0.37)
(0.63)
EUR
A (0.20)
(0.80)
AMR
A (0.15)
(0.85)
BDNF - brain derived neurotrophic factor
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_001143805.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137277.1
NM_001143806.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137278.1
NM_001143807.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137279.1
NM_001143808.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137280.1
NM_001143809.1 1281 Missense Mutation ATG,GTG M,V 95 NP_001137281.1
NM_001143810.1 1281 Missense Mutation ATG,GTG M,V 148 NP_001137282.1
NM_001143811.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137283.1
NM_001143812.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137284.1
NM_001143813.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137285.1
NM_001143814.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137286.1
NM_001143816.1 1281 Missense Mutation ATG,GTG M,V 66 NP_001137288.1
NM_001709.4 1281 Missense Mutation ATG,GTG M,V 66 NP_001700.2
NM_170731.4 1281 Missense Mutation ATG,GTG M,V 74 NP_733927.1
NM_170732.4 1281 Missense Mutation ATG,GTG M,V 66 NP_733928.1
NM_170733.3 1281 Missense Mutation ATG,GTG M,V 66 NP_733929.1
NM_170734.3 1281 Missense Mutation ATG,GTG M,V 81 NP_733930.1
NM_170735.5 1281 Missense Mutation ATG,GTG M,V 66 NP_733931.1
XM_011520280.2 1281 Missense Mutation ATG,GTG M,V 148 XP_011518582.1
BDNF-AS - BDNF antisense RNA
There are no transcripts associated with this gene.

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