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- Gene Symbol:
-
CASC1 - Entrez Gene ID
- 55259
- Gene Name:
- cancer susceptibility candidate 1
- Gene Aliases
- LAS1, PPP1R54
- Gene Chromosome Location
- Chr.12: on Build GRCh38
- UniGene
- Hs.407771
- Species:
- Human
- Primer Chromosome Location
- Chr.12: 25114787-25115048 on Build GRCh38 View in UCSC browser
- Amplicon Length
- 262
- Primer Sequences
- Log in to view
- Ampliseq ID's
Genomic Map
Back To TopAssay Details
Gene Information
| CASC1 | |||||
|---|---|---|---|---|---|
| Accession | Protein | COSMIC ID | Mutation | AA | |
| RefSeq | NM_001082972.2 | NP_001076441.1 | 4040958 | c.1579T>C | p.W527R |
| 1199604 | c.1584A>C | p.R528S | |||
| 3459491 | c.1607C>T | p.S536F | |||
| 6620356 | c.1621G>T | p.E541* | |||
| 1705333 | c.1580G>A | p.W527* | |||
| 3459493 | c.1596C>T | p.I532I | |||
| 1676790 | c.1599C>A | p.S533R | |||
| 3459489 | c.1638C>T | p.F546F | |||
| 5739595 | c.1592G>A | p.G531D | |||
| 4040956 | c.1593C>T | p.G531G | |||
| 5799503 | c.1573A>C | p.K525Q | |||
| NM_001082973.2 | NP_001076442.1 | - | - | - | |
| NM_001204101.2 | NP_001191030.1 | - | - | - | |
| NM_001204102.2 | NP_001191031.1 | - | - | - | |
| NM_001319977.1 | NP_001306906.1 | - | - | - | |
| NM_001319978.1 | NP_001306907.1 | - | - | - | |
| NM_018272.4 | NP_060742.3 | - | - | - | |
| XM_005253406.1 | XP_005253463.1 | - | - | - | |
| XM_005253408.1 | XP_005253465.1 | - | - | - | |
| XM_005253409.1 | XP_005253466.1 | - | - | - | |
| XM_006719101.1 | XP_006719164.1 | - | - | - | |
| XM_011520723.1 | XP_011519025.1 | - | - | - | |
| XM_011520726.1 | XP_011519028.1 | - | - | - | |
| XM_011520727.1 | XP_011519029.1 | - | - | - | |
| XM_017019560.1 | XP_016875049.1 | - | - | - | |
| XM_017019561.1 | XP_016875050.1 | - | - | - | |
| XM_017019562.1 | XP_016875051.1 | - | - | - | |
| XM_017019563.1 | XP_016875052.1 | - | - | - | |
| XM_017019564.1 | XP_016875053.1 | - | - | - | |
| XM_017019565.1 | XP_016875054.1 | - | - | - | |
| XM_017019566.1 | XP_016875055.1 | - | - | - | |
| XM_017019567.1 | XP_016875056.1 | - | - | - | |
| XM_017019568.1 | XP_016875057.1 | - | - | - | |
| GenBank | AK001783.1 | BAA91908.1 | - | - | - |
| AK093102.1 | - | - | - | ||
| AK297998.1 | - | - | - | ||
| AK301763.1 | - | - | - | ||
| AK302235.1 | - | - | - | ||
| AK304602.1 | - | - | - | ||
| AY423543.1 | AAQ93499.1 | - | - | - | |
| BC028415.1 | AAH28415.1 | - | - | - | |
| BC031047.1 | - | - | - | ||
| BC047415.1 | - | - | - | ||
| BC057795.1 | - | - | - | ||
| BC117281.1 | - | - | - | ||
| BC117283.1 | - | - | - | ||
| ENST00000320267.0 | 1676789 | c.1407C>A | p.S469R | ||
| 3459492 | c.1404C>T | p.I468I | |||
| 3459488 | c.1446C>T | p.F482F | |||
| 3459490 | c.1415C>T | p.S472F | |||
| 1705332 | c.1388G>A | p.W463* | |||
| 6620355 | c.1429G>T | p.E477* | |||
| 4040955 | c.1401C>T | p.G467G | |||
| 1199603 | c.1392A>C | p.R464S | |||
| 4040957 | c.1387T>C | p.W463R | |||
| 5739594 | c.1400G>A | p.G467D | |||
| 5799502 | c.1381A>C | p.K461Q | |||
Phenotype
Literature Links: |
CASC1 PubMed Links |
SNP ID
rs917369463rs1028711169rs903442270rs138857644rs751574717rs10842471rs1000764366rs761067876rs571447540rs995908936rs547951536rs751019876rs950046033rs763598563rs542216559rs560542807rs752358122rs765008474rs758962930rs757967839rs1056281463rs763490934rs946104067rs1033220102Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114897-25114897 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114994-25114994 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114877-25114881 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114970-25114970 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
|
|||||
AMR
|
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114898-25114898 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25115006-25115006 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
|
|||||
AMR
|
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114942-25114942 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114820-25114820 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25115011-25115011 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
|
|||||
AMR
|
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114985-25114985 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25115010-25115010 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114888-25114889 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114819-25114819 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25115003-25115003 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114946-25114946 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
|
|||||
AMR
|
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114948-25114948 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
|
|||||
AMR
|
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114840-25114840 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114821-25114821 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114905-25114906 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114842-25114842 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114860-25114860 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114875-25114875 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114940-25114940 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Submission count
NAAllele Nomenclature
Chromosome Location
Chr.12: 25114960-25114960 on Build GRCh38Allele Frequency
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
Back To TopMore Information
Set Membership: |
Between 200-400 bp
|
Format:
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
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