Assay Details

Gene Symbol: MMP9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_004994.2	NP_004985.2	8 - 9	1354		67
GenBank mRNA	AK298246.1	-	8 - 9	1277		67
	AK301446.1	-	6 - 7	1015		67
	AK302530.1	-	3 - 4	506		67
	AK303080.1	-	6 - 7	1074		67
	AK313137.1	-	8 - 9	1354		67
	AK316145.1	-	9 - 10	1257		67
	BC006093.1	-	8 - 9	1340	4054882	67
	CN288579.1	-	3 - 4	542		67
	J05070.1	-	8 - 9	1354		67

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000007514.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000363.hg.1

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Protease

Mammalian Gene Collection

Recommended Assay

Homo sapiens

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene MMP9

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR20005254.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20005254.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20005254.hg.1	TC20000363.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20005251.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20005251.hg.1	ENST00000545925.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20005251.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20005251.hg.1	TC20000363.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20005252.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20005252.hg.1	ENST00000545925.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20005252.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20005252.hg.1	TC20000363.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20005253.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20005253.hg.1	ENST00000545925.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20005253.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20005253.hg.1	TC20000363.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	PSR2000152447.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2000152447.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	PSR2000152447.hg.1	TC2000007514.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000152447.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2000152447.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	TC2000007514.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	PSR2000152448.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2000152448.hg.1	NM_004994.2	Refseq
Affymetrix Human Clariom D Assay	PSR2000152448.hg.1	TC2000007514.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000152448.hg.1	ENST00000372330.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2000152448.hg.1	NM_004994.2	Refseq

Availability	Inventoried
Catalog #	4331182
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Genomic Map