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Visualize your imaging data and obtain qualitative and quantitative information such as volume, density and diameter, from a single software environment.
Anatomical image analysis relies on augmenting structural information from micro-CT or MRI systems with functional data from PET, SPECT or optical imaging instrumentation. Analysis of novel drug candidates requires pinpointing the location of dynamic processes acquired with functional modalities in images of the animal’s anatomy from structural modalities over time.
Amira Software enables the fusion of any type of anatomical image data. Co-registered images can be segmented and analyzed using Amira Software’s vast library of image analysis filters and algorithms. Image segmentation and quantification workflows can be applied to entire time series of image data of dynamic processes. With Amira Software’s professional-grade visualization tools, structural information from CT and MRI can be augmented and rendered jointly with segmentation results and functional images to create visualization of physiological processes that reveal the underlying mechanisms in an intuitive animation.
Imaging data
Processing
Visualization
Analysis
신뢰성
이 제품은 강력한 분할 및 이미지 프로세싱 기능 및 워크플로우, 20년 이상 이어진 과학계 및 수천 명의 연구자들과의 협력으로 생체의학 및 생명과학 연구 분야에서 신뢰할 만한 해답을 제공하는 디지털 이미징 기반 워크플로우로 입증되었습니다.
맞춤화
고객의 요구 사항은 고유하고 지속적으로 발전하고 있기 때문에 당사의 소프트웨어 솔루션은 완벽하게 유연성을 갖추고 있으며 맞춤화가 가능합니다. 스크립팅 인터페이스(Python, TCL), MATLAB와의 연결, 프로그래밍 API 덕분에 소프트웨어 솔루션을 확장하고 자체 IP(지적 재산권)를 통합할 수 있습니다. 또한 필요에 따라 당사의 전문 서비스팀이 고객의 요구에 맞는 고유한 솔루션을 설계할 수 있도록 도와드립니다.
지원
전담 전문가 지원팀 덕분에 최고의 전문가들에게 문의할 수 있어 의문 사항을 확실히 해결할 수 있습니다. 그리고 교육, 컨설팅 옵션, 지속적으로 확장되는 학습 자료 및 방법 컬렉션을 통해 보다 쉽게 학습하고 해답을 얻는 데 집중할 수 있습니다.
자동화
자동화 기능과 계속해서 확장되는 온라인 애드온 저장소(Xtra Gallery)를 추가하게 되어 반복 가능한 워크플로우를 쉽게 재현가능한 레시피로 캡슐화할 수 있습니다. 인공 지능이 추가되어 비이미지 처리 분석 전문가를 통한 분석이 가능하며 복잡한 분석에서 시간을 절약하는 동시에 결과의 일관성을 보장합니다.
VetCore, University of Veterinary Medicine uses Amira Software
"Research at Vetmeduni Vienna is quite diverse, covering both clinical and preclinical research areas. We are currently four people working in the imaging facility, providing equipment and supports for researchers in both image acquisition (widefield microscopy, CLSM, spinning disk confocal microscopy, soon also STORM super-resolution microscopy, microscopic X-ray computed tomography) and in data visualization and analysis. Amira Software allows you to build networks, enabling complex interactions between data objects. Biology is also complex, and biological interactions are complex networks. Complex questions require complex tools to address them. In this respect, analysis networks such as used in Amira Software outperform most other software approaches when it comes to complex data analysis. Furthermore, I like that Amira Software is quite open concerning integration of deep learning networks and scripting (Tcl, Matlab, Python,...)."
Stephan Handschuch, PhD
VetCore, University of Veterinary Medicine, Vienna
Insight from your peers
Explore industry-leading insights and research that can support your lab workflow. Amira Software can empower your lab with a cutting-edge, comprehensive imaging data analysis toolbox.
Helping scientists answer questions that enable breakthrough discoveries in life sciences, materials science, and industry.
 | Correlative Microscopy: Using Amira Software to Understand the Spread of Cancer Read more |
 | Amira Software Accelerates Veterinary Research with 3D Visualization and Analysis Read more |
 | Molecular Clarity—Discovering What’s Possible with Cryo-Electron Tomography Read more |
 | Cryo-Electron Tomography and 3D Software Advances Coronavirus Research Read more |
Understanding the complexity of cancer with correlative light electron microscopy and Amira Software
Co-registration
One of the main reasons researchers are using preclinical imaging is in vivo distribution studies aimed at localizing therapeutic agents in drug or gene therapy. These agents are often tagged or made susceptible for tagging with radioactive nuclei for detection with PET or SPECT imaging instruments.
With its extensive, performance-optimized registration tools and its multi-volume architecture, Amira Software allows preclinical researchers to automatically co-register image data from any type of preclinical imaging instrumentation. Amira Software’s extensive toolbox of segmentation and quantification tools then allows for segmentation of the anatomical images and quantifying radiotracer uptake in the co-registered functional images.
Bone separation
Micro-CT image acquisition is one of the most popular imaging techniques for any type of bone research. One of the first steps for any bone analysis is bone segmentation and separation into individual bones.
Amira Software offers the tools to perform bone segmentation from the surrounding tissue. The segmented bones can then be separated with Amira Software’s advanced algorithms. The individual bones can then be measured using a customizable list of the many measurements that Amira Software provides, such as size, shape and orientation.
Cell detection
Cellular spheroids are 3D cell cultures that represent in vivo tissue better than traditional cellular monolayers, improving the ability of researchers to study cancer, diabetes mellitus, or stem cells among many applications.
However, cell analysis in such 3D multicellular objects is not accurately possible, especially without destroying the object of study. Amira Software can automatically separate the cells and perform volumetric, morphometric, and intensity measurements on individual cells and their nuclei in 3D image data of these spheroids. Amira Software also helps researchers with the analysis of conventional 2D cellular monolayers.
Correlative imaging
With its long-standing applications in multi-modality imaging techniques, Amira Software is the tool of choice for many researchers working with data from different imaging modalities. Amira Software’s architecture supports multi-volume data processing and visualization from the ground up.
The automatic registration tools integrated into the standard edition of Amira Software with the Multi-Planar Workroom offer the flexibility of the most commonly used automated registration metrics and optimizers. These allow for the adjustment of the registration parameters to meet the needs of your data.
Membrane detection
Amira Software accelerates segmentation by employing automated detection of cellular features, such as filaments and membranes.
By performing advanced image analysis and statistics on the cryo-tomograms, Amira Software combines data from these individual structures, averaging out noise and increasing contrast to create a composite model with higher resolution.
Co-registration
One of the main reasons researchers are using preclinical imaging is in vivo distribution studies aimed at localizing therapeutic agents in drug or gene therapy. These agents are often tagged or made susceptible for tagging with radioactive nuclei for detection with PET or SPECT imaging instruments.
With its extensive, performance-optimized registration tools and its multi-volume architecture, Amira Software allows preclinical researchers to automatically co-register image data from any type of preclinical imaging instrumentation. Amira Software’s extensive toolbox of segmentation and quantification tools then allows for segmentation of the anatomical images and quantifying radiotracer uptake in the co-registered functional images.
Bone separation
Micro-CT image acquisition is one of the most popular imaging techniques for any type of bone research. One of the first steps for any bone analysis is bone segmentation and separation into individual bones.
Amira Software offers the tools to perform bone segmentation from the surrounding tissue. The segmented bones can then be separated with Amira Software’s advanced algorithms. The individual bones can then be measured using a customizable list of the many measurements that Amira Software provides, such as size, shape and orientation.
Cell detection
Cellular spheroids are 3D cell cultures that represent in vivo tissue better than traditional cellular monolayers, improving the ability of researchers to study cancer, diabetes mellitus, or stem cells among many applications.
However, cell analysis in such 3D multicellular objects is not accurately possible, especially without destroying the object of study. Amira Software can automatically separate the cells and perform volumetric, morphometric, and intensity measurements on individual cells and their nuclei in 3D image data of these spheroids. Amira Software also helps researchers with the analysis of conventional 2D cellular monolayers.
Correlative imaging
With its long-standing applications in multi-modality imaging techniques, Amira Software is the tool of choice for many researchers working with data from different imaging modalities. Amira Software’s architecture supports multi-volume data processing and visualization from the ground up.
The automatic registration tools integrated into the standard edition of Amira Software with the Multi-Planar Workroom offer the flexibility of the most commonly used automated registration metrics and optimizers. These allow for the adjustment of the registration parameters to meet the needs of your data.
Membrane detection
Amira Software accelerates segmentation by employing automated detection of cellular features, such as filaments and membranes.
By performing advanced image analysis and statistics on the cryo-tomograms, Amira Software combines data from these individual structures, averaging out noise and increasing contrast to create a composite model with higher resolution.
입문 교육
Amira, Avizo 및 PerGeos Software 신규 사용자를 위해 특별히 설계된 이 입문 교육을 통해 학습 커브를 단축하고 투자를 극대화 해보세요.
이 교육은 실습 교육이 있는 강의로 이루어져 있습니다. 교육 자료는 Amira, Avizo 및 PerGeos Software의 기본 기능과 특징을 조명합니다.
고급 교육
Amira, Avizo 및 PerGeos Software의 기존 사용자를 위해 특별히 설계된 이 고급 교육을 통해 결과를 얻기 까지의 시간을 단축하고 투자를 극대화 해보세요.
이 교육은 실습 교육이 있는 강의로 이루어져 있습니다. 교육 자료는 Amira, Avizo 및 PerGeos Software의 고급 기능과 특징을 조명합니다.
맞춤형 개발
3D 및 이미지 프로세싱에서의 25년 이상의 경험과 크고 작은 조직에 수 백개의 맞춤형 프로젝트를 제공해 온 Thermo Fisher Scientific은 특정 요구에 맞는 맞춤형 솔루션을 제공할 수 있습니다.
저희는 당사의 소프트웨어를 다양한 수준으로 맞춤화하고 확장할 수 있습니다.
Brochure of Amira Software
Learn more about Amira Software for life sciences, a powerful, comprehensive, and versatile 2D–5D solution for visualizing, analyzing and understanding life science and biomedical research data from many image modalities.
Amira Software packages
Learn more about Amira Software for life sciences packages, to discover what optional package could dramatically boost your productivity and push the boundaries of your image analysis projects..
Understanding the passage of air through the upper airways is crucial for planning corrective rhinosurgery when undisturbed airflow is inhibited by persistent obstructions or deformities.
Micro-CT image acquisition is one of the most popular imaging techniques for any type of bone research. One of the first steps for any bone analysis is bone segmentation and separation into individual bones.
Discover how Amira-Avizo Software enables the whole 3D printing workflow, from 2D image stack import, to 3D reconstruction and 3D meshing, right through to 3D printer compatible formats export. Data courtesy of National University of Singapore.
Amira Software can automatically count the cell nuclei which correspond to the cell count of the 3D spheroid cell cultures.
Discover the capabilities of Amira Software. Transforming image data into interactive 3D models, aiding anatomical biology. Navigate high-resolution imaging from MRI, CT, light microscopy, and electron microscopy.
Courtesy of National Laboratory Animal Center - National Applied Research Laboratories, Taiwan.
Co-registration for distribution studies. CT/SPECT data courtesy of Dr. Nabil Boutagy of the Yale Translation Research Imaging Center.
Maximum intensity projection and surface reconstruction of a mouse thorax. Acquisition device: VAMP TomoScope® 30s+, Amira Software - Courtesy of Dr. Elizatea Stepina and Dr. Peter Hauff, Bayer Healthcare.
Brochure of Amira Software
Learn more about Amira Software for life sciences, a powerful, comprehensive, and versatile 2D–5D solution for visualizing, analyzing and understanding life science and biomedical research data from many image modalities.
Amira Software packages
Learn more about Amira Software for life sciences packages, to discover what optional package could dramatically boost your productivity and push the boundaries of your image analysis projects..
Understanding the passage of air through the upper airways is crucial for planning corrective rhinosurgery when undisturbed airflow is inhibited by persistent obstructions or deformities.
Micro-CT image acquisition is one of the most popular imaging techniques for any type of bone research. One of the first steps for any bone analysis is bone segmentation and separation into individual bones.
Discover how Amira-Avizo Software enables the whole 3D printing workflow, from 2D image stack import, to 3D reconstruction and 3D meshing, right through to 3D printer compatible formats export. Data courtesy of National University of Singapore.
Amira Software can automatically count the cell nuclei which correspond to the cell count of the 3D spheroid cell cultures.
Discover the capabilities of Amira Software. Transforming image data into interactive 3D models, aiding anatomical biology. Navigate high-resolution imaging from MRI, CT, light microscopy, and electron microscopy.
Courtesy of National Laboratory Animal Center - National Applied Research Laboratories, Taiwan.
Co-registration for distribution studies. CT/SPECT data courtesy of Dr. Nabil Boutagy of the Yale Translation Research Imaging Center.
Maximum intensity projection and surface reconstruction of a mouse thorax. Acquisition device: VAMP TomoScope® 30s+, Amira Software - Courtesy of Dr. Elizatea Stepina and Dr. Peter Hauff, Bayer Healthcare.
이미징 데이터 가져오기 및 프로세스
- 모든 종류, 스케일, 사이즈 처리:
- Bio-Formats
- Bitmap 형식
- 현미경: 전자 및 광학
- 의학 및 뉴로이미지 형식
- 분자 형식
- 기타 획득 장치 (MRI, 방사선 촬영 등)
- 유한 요소 모델링, 기하학적 모델링, CAD
- 다중 데이터/다중 뷰, 다중 채널, 타임 시리즈, 대량 데이터 지원
- 스케일링, 보정, 변환, 리샘플링(re-sampling)
- 이미지 개선, 종합적인 필터링 및 컨볼루션, 푸리에 주파수 변환
- 아티팩트(artifact) 감소 알고리즘
- 고급 다중 모드 2D/3D 자동 등록
- 이미지 스택 정렬, 산술, 상관 관계, 결합
이미징 데이터를 쉽게 세분화
- 임계값 계산 및 자동 세분화, 개체 분리, 자동 레이블 지정
- 영역 확대, 스네이크, 보간, 래핑, 평활
- 유역 및 분지를 포함한 형태학적 처리
- 머신 러닝 기반 세분화
- 개별 섬유 및 필라멘트 자동 추적
- 골격화 및 필라멘트 네트워크 추출
- 분할 및 공간 그래프 생성이나 편집을 위한 상호작용식 도구
- 3D 표면 재현
- FEA/CFD를 위한 그리드 생성
분석 및 시각화 작업을 원활하게 출판하고 발표하기 위해 내보내기(export) 하세요.
- 애니메이션 및 동영상 생성
- 고급 키 프레임 및 객체 애니메이션
- 이미지, 기하학적 모델, 측정 및 시뮬레이션 혼합
- 주석, 측정 범례, 히스토그램 및 곡선 플롯
- 스프레드시트 내보내기, 3D 모델, 고품질 이미지
- 능동 및 수동 방식 3D 스테레오 비전
- 단일 및 타일형 화면 디스플레이
- 몰입형 환경
이미징 데이터를 시각화하고 탐색해보세요.
- 상호작용식 고품질 볼륨 및 멀티채널 시각화
- 직교, 경사, 원통형 및 곡선 슬라이싱
- 윤곽 및 등면(iso-surface) 추출
- 최대 강도 또는 기타 유형의 투영
- 벡터 및 텐서 시각화
- 객체 및 추적
- 분자적 시각화
이미징 데이터를 분석하고 정량적 정보를 얻어보세요.
- 직관적인 레시피 생성, 사용자 맞춤화, 자동 재생
- 카운트, 볼륨, 영역, 경계선, 가로세로비 및 방향을 포함한 측정 방법 내장
- 사용자 정의 측정
- 스프레드시트 도구 및 차트를 사용하는 결과 뷰어
- 자동 개별 형상 측정, 3D 국소화 및 스프레드시트 선택
- 통계 자동화, 분포 그래프
- 측정 기준을 사용한 형상 필터링
- 데이터 정합, 변형, 비교 및 측정
Amira Software를 특별한 요구에 맞게 쉽고 신속하게 조정해보세요.
- 맞춤형 C++ 모듈 개발
- MATLAB™ bridge
- Python 스크립팅 API
For Research Use Only. Not for use in diagnostic procedures.
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