Search Thermo Fisher Scientific
Search Thermo Fisher Scientific
Superior coverage to get more genomes sequenced, and sequenced faster
The accuracy and throughput of the 5500xl Genetic Analyzer enables unparalleled de novo assembly of novel genomes, opening the way to detailed genetic analysis of any organism.
When designing your own experiment, consider important parameters such as coverage, size, accuracy, and sensitivity; library type (fragment or mate paired?); and read length. Technical Considerations:
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Learn More:
The SOLiD Community User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub. |
Learn More: User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub. 5500 Series User Hub |
The tools you need for each step in the de novo sequencingdata analysis workflow:
Data Analysis Step | Applied Biosystems Software | 3rd-Party Software |
---|---|---|
1. Align reads to reference in color space | ||
2. Generate quality metrics and perform mate pair rescue | ||
3. Generate sequencing and alignment statistics | ||
4. Identify Polymorphisms | ||
5. Translate color space to base space | ||
6. Visualize in context of annotation | ||
7. Convert SRF for publishing | ||
*** Need XSQ --> csfasta/qual converter |
Learn more
The tools you need for each step in the de novo sequencing data analysis workflow:
Capillary electrophoresis-based de novo sequencing
When designing your own experiment, consider important parameters such as coverage, size, accuracy, and sensitivity; library type (fragment or mate paired?); and read length. Technical Considerations:
Learn More:
|
Learn More:
The SOLiD Community User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub. |
Learn More: User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub. 5500 Series User Hub |
The tools you need for each step in the de novo sequencingdata analysis workflow:
Data Analysis Step | Applied Biosystems Software | 3rd-Party Software |
---|---|---|
1. Align reads to reference in color space | ||
2. Generate quality metrics and perform mate pair rescue | ||
3. Generate sequencing and alignment statistics | ||
4. Identify Polymorphisms | ||
5. Translate color space to base space | ||
6. Visualize in context of annotation | ||
7. Convert SRF for publishing | ||
*** Need XSQ --> csfasta/qual converter |
Learn more
The tools you need for each step in the de novo sequencing data analysis workflow:
Capillary electrophoresis-based de novo sequencing
When designing your own experiment, consider important parameters such as coverage, size, accuracy, and sensitivity; library type (fragment or mate paired?); and read length. Technical Considerations:
Learn More:
|
Learn More:
The SOLiD Community User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub. |
Learn More: User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub. 5500 Series User Hub |
The tools you need for each step in the de novo sequencingdata analysis workflow:
Data Analysis Step | Applied Biosystems Software | 3rd-Party Software |
---|---|---|
1. Align reads to reference in color space | ||
2. Generate quality metrics and perform mate pair rescue | ||
3. Generate sequencing and alignment statistics | ||
4. Identify Polymorphisms | ||
5. Translate color space to base space | ||
6. Visualize in context of annotation | ||
7. Convert SRF for publishing | ||
*** Need XSQ --> csfasta/qual converter |
Learn more
The tools you need for each step in the de novo sequencing data analysis workflow:
Capillary electrophoresis-based de novo sequencing
When designing your own experiment, consider important parameters such as coverage, size, accuracy, and sensitivity; library type (fragment or mate paired?); and read length. Technical Considerations:
Learn More:
|
Learn More:
The SOLiD Community User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub. |
Learn More: User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub. 5500 Series User Hub |
The tools you need for each step in the de novo sequencingdata analysis workflow:
Data Analysis Step | Applied Biosystems Software | 3rd-Party Software |
---|---|---|
1. Align reads to reference in color space | ||
2. Generate quality metrics and perform mate pair rescue | ||
3. Generate sequencing and alignment statistics | ||
4. Identify Polymorphisms | ||
5. Translate color space to base space | ||
6. Visualize in context of annotation | ||
7. Convert SRF for publishing | ||
*** Need XSQ --> csfasta/qual converter |
Learn more
The tools you need for each step in the de novo sequencing data analysis workflow:
Capillary electrophoresis-based de novo sequencing