Primary Antibodies for Green and Yellow Lasers

Flow cytometry analysis with a green or yellow laser

With the growing availability of flow cytometers equipped with green (532 nm) and yellow (561 nm) lasers, green light-excitable and yellow light-excitable fluorophores are playing an increasingly critical role in standard multi-parametric flow cytometry. The expansive Alexa Fluor dye, eFluor dye, and NovaFluor dye portfolios support multi-color immunophenotyping by flow cytometry and includes a variety of dyes compatible with the 532 and 561 nm spectral lines of the green and yellow lasers, respectively.

Properties of fluorescent dyes for green and yellow lasers

The table below lists the properties of the most commonly used fluorophores for green and yellow lasers.

FluorophoreFluorophore typeEx/Em (nm)Relative intensity* (1 = lowest, 5 = highest)Suggested bandpass filter (nm)Uses
Alexa Fluor 532Organic dye532, 532/5543555/20Yellow-fluorescent dye with excitation ideally suited for the 532 nm laser
Alexa Fluor 561Organic dye561, 558/5753555/20A bright dye optimized for flow cytometers with spectral capabilities which can replace PE to reduce emission spreading into PE tandem dyes
NovaFluor Yellow 570Phiton technology561, 552/5682575/26Alternative to phycoerythrin (PE) with similar emission spectrum and less cross-laser excitation
R-Phycoerythrin (R-PE, PE)Protein496, 565/5755575/26Widely used fluorophore with a high quantum yield that is ideal for detection of low-density antigens
NovaFluor Yellow 590Phiton technology561, 552/5904590/40A unique emission spectrum, which fits in between some PE-tandem dyes, allowing the detection of an additional marker in a complex multi-color panel
PE-eFluor 610Tandem496, 565/6073610/20Tandem dye, resonance energy transfer from PE molecule to eFluor 610; can be used as a brighter alternative to PE-Texas Red dye
NovaFluor Yellow 610Phiton technology561, 552/6123590/40Can be used to replace some PE-tandem dyes with less cross-excitation and lower spectral spillover, allowing detection of an additional marker labeled with one of the NovaFluor Blue 610 dyes
PE-Texas RedTandem496, 565/6153590/40Tandem dye, resonance energy transfer from PE molecule to Texas Red dye
PE-Alexa Fluor 610Tandem496, 565/6283590/40Tandem dye, resonance energy transfer from PE molecule to Alexa Fluor 610 dye
NovaFluor Yellow 660Phiton dye561, 552/6633670/14Can be used to replace some PE tandem dyes with less cross-excitation and fluorescent spillover, allowing for an additional marker to be detected with the blue laser line using NovaFluor Blue 660
PE-Cyanine 5 (TRI-COLOR)Tandem496, 565/6673670/14Tandem dye, resonance energy transfer from PE molecule to the Cyanine 5 dye
NovaFluor Yellow 690Phiton dye561, 552/6903695/40Emission spectrum that fits between the emission peaks of PE-Cyanine 5 and PE-Cyanine 7, allowing detection of an additional marker in a complex multi-color panel using a spectral flow cytometer
PE-Cyanine 5.5Tandem496, 565/6944695/40Tandem dye, resonance energy transfer from PE molecule to the Cyanine 5.5 dye
NovaFluor Yellow 700Phiton dye561, 552/7004695/40Can be used as an alternative to PE-Cyanine 5.5, with less cross-laser excitation and spectral spillover
PE-Alexa Fluor 700Tandem496, 565/7233695/40Tandem dye, resonance energy transfer from PE molecule to Alexa Fluor 700 dye
NovaFluor Yellow 730Phiton dye561, 552/7303695/40Can be used as an alternative to PE-Cyanine 5.5, with far less cross-laser excitation and spectral spillover; NovaFluor Yellow 690, NovaFluor Yellow 700, and NovaFluor 730 dyes cannot be used together with conventional flow cytometry, but their distinct spectral signatures allow them to be successfully unmixed using a spectral flow cytometer
NovaFluor Yellow 755Phiton dye551/7553780/60Can be used as a non-tandem alternative to PE-Cyanine 7 and cFluor® BYG750 with significantly less cross-laser excitation from the blue (488 nm) laser.
PE-Cyanine 7Tandem496, 565/7674780/60Tandem dye, resonance energy transfer from PE molecule to Cyanine 7 dye
* The relative intensity of any fluorophore is dependent upon cell type being studied, reagent used, instrument, and instrument configuration. The relative intensities provided are to be used as a guideline; observed intensities may vary.

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