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Once the reference sequence for a given organism is completed, you can perform comparative genome sequencing to characterize the genetic diversity within the species or between closely related species.
With superior throughput and accuracy, the 5500xl Genetic Analyzer is the platform of choice for cost-effective variant detection. Generating over 20 Gb of sequence a day with up to 99.99% accuracy gives you more mapped reads and less redundancy and “noise.” In addition, significantly higher physical coverage from mate-paired libraries compared to paired-end approaches enables you to get more accurate variant detection with much lower coverage than competitive platforms.
For Research Use Only. Not intended for any animal or human therapeutic or diagnostic use.
Learn More
User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub.
User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub.
The tools you need for each step in the targeted sequencing workflow:
Data Analysis Step | Applied Biosystems Software | 3rd-Party Software*** |
---|---|---|
1. Align reads to reference in color space |
| |
2. Generate quality metrics and perform mate pair rescue |
| |
3. Generate sequencing and alignment statistics |
| |
4. Identify Polymorphisms |
| |
5. Translate color space to base space | ||
6. Visualize in context of annotation |
| |
7. Convert SRF for publishing | ||
*** Need XSQ --> csfasta/qual converter |
Learn more
Validate results using our VariantSEQr™ Resequencing System, which uses our capillary electrophoresis-based DNA sequencers. For a list of recommended products visit our capillary electrophoresis pages below.
Learn More
User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub.
User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub.
The tools you need for each step in the targeted sequencing workflow:
Data Analysis Step | Applied Biosystems Software | 3rd-Party Software*** |
---|---|---|
1. Align reads to reference in color space |
| |
2. Generate quality metrics and perform mate pair rescue |
| |
3. Generate sequencing and alignment statistics |
| |
4. Identify Polymorphisms |
| |
5. Translate color space to base space | ||
6. Visualize in context of annotation |
| |
7. Convert SRF for publishing | ||
*** Need XSQ --> csfasta/qual converter |
Learn more
Validate results using our VariantSEQr™ Resequencing System, which uses our capillary electrophoresis-based DNA sequencers. For a list of recommended products visit our capillary electrophoresis pages below.
Learn More
User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub.
User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub.
The tools you need for each step in the targeted sequencing workflow:
Data Analysis Step | Applied Biosystems Software | 3rd-Party Software*** |
---|---|---|
1. Align reads to reference in color space |
| |
2. Generate quality metrics and perform mate pair rescue |
| |
3. Generate sequencing and alignment statistics |
| |
4. Identify Polymorphisms |
| |
5. Translate color space to base space | ||
6. Visualize in context of annotation |
| |
7. Convert SRF for publishing | ||
*** Need XSQ --> csfasta/qual converter |
Learn more
Validate results using our VariantSEQr™ Resequencing System, which uses our capillary electrophoresis-based DNA sequencers. For a list of recommended products visit our capillary electrophoresis pages below.
Learn More
User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub.
User documentation for the 5500 Series Genetic Analysis Systems can be found on the SOLiD Community. Access is through the 5500 Series User Hub. Access is limited to 5500 Series Genetic Analysis Systems users who are registered on the solid community and have been authenticated through the process of requesting permission to join the 5500 Series User Hub.
The tools you need for each step in the targeted sequencing workflow:
Data Analysis Step | Applied Biosystems Software | 3rd-Party Software*** |
---|---|---|
1. Align reads to reference in color space |
| |
2. Generate quality metrics and perform mate pair rescue |
| |
3. Generate sequencing and alignment statistics |
| |
4. Identify Polymorphisms |
| |
5. Translate color space to base space | ||
6. Visualize in context of annotation |
| |
7. Convert SRF for publishing | ||
*** Need XSQ --> csfasta/qual converter |
Learn more
Validate results using our VariantSEQr™ Resequencing System, which uses our capillary electrophoresis-based DNA sequencers. For a list of recommended products visit our capillary electrophoresis pages below.
仅供科研使用,不可用于诊断目的。